Package Bio :: Package Fasta :: Class _FastaTitleIndexer
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Class _FastaTitleIndexer

source code

Mindy.SimpleSeqRecord.BaseSeqRecordIndexer --+
                                             |
                                            _FastaTitleIndexer

Simple indexer to index by the title of a FASTA record.

This doesn't do anything fancy, just gets the title and uses that as the identifier.

Instance Methods [hide private]
 
__init__(self) source code
 
primary_key_name(self) source code
 
secondary_key_names(self) source code
 
get_id_dictionary(self, seq_record) source code

Inherited from Mindy.SimpleSeqRecord.BaseSeqRecordIndexer: get_builder

Method Details [hide private]

__init__(self)
(Constructor)

source code 
Overrides: Mindy.SimpleSeqRecord.BaseSeqRecordIndexer.__init__

primary_key_name(self)

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Overrides: Mindy.SimpleSeqRecord.BaseSeqRecordIndexer.primary_key_name

secondary_key_names(self)

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Overrides: Mindy.SimpleSeqRecord.BaseSeqRecordIndexer.secondary_key_names

get_id_dictionary(self, seq_record)

source code 
Overrides: Mindy.SimpleSeqRecord.BaseSeqRecordIndexer.get_id_dictionary