Work with the clustal aligment format.
This format is the default output from clustal -- these files normally
have an extension of .aln.
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__init__(self,
alphabet=Gapped(IUPACAmbiguousDNA(), '-'))
Initialize a new Alignment object. |
source code
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_add_star_info(self,
stars)
Add all of the stars, which indicate consensus sequence. |
source code
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_add_version(self,
version)
Add the version information about the clustal file being read. |
source code
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Inherited from Align.Generic.Alignment :
__iter__ ,
__repr__ ,
add_sequence ,
get_alignment_length ,
get_all_seqs ,
get_column ,
get_seq_by_num
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