Package Bio :: Package LocusLink :: Module web_parse
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Module web_parse

source code

Classes [hide private]
  Token
  Url
  Record
  LocusLinkParser
Functions [hide private]
 
is_empty_container(item) source code
 
is_container(item) source code
 
is_substring(a, b) source code
 
print_params(params) source code
 
process_list(params) source code
 
put(dict, key, val) source code
 
process_dict(params) source code
 
is_open_token(target) source code
 
is_close_token(target) source code
 
is_token(target) source code
Variables [hide private]
  open_list = Token('open_list')
  close_list = Token('close_list')
  open_dict = Token('open_dict')
  close_dict = Token('close_dict')
  handle = open('Hs13225.htm')
  undo_handle = Bio.File.UndoHandle(handle)
  locuslink_parser = LocusLinkParser()
  record = locuslink_parser.parse(handle)
  __warningregistry__ = {('Bio.LocusLink was deprecated, as NCBI...
Variables Details [hide private]

__warningregistry__

Value:
{('Bio.LocusLink was deprecated, as NCBI\'s LocusLink was superceded b\
y Entrez Gene. If you still need this module, please get in touch with\
 the Biopython developers (biopython-dev@biopython.org) to avoid perma\
nent removal of this module',
  <type 'exceptions.DeprecationWarning'>,
  11): 1}